CDS
| Accession Number | TCMCG051C26066 |
| gbkey | CDS |
| Protein Id | XP_002311536.1 |
| Location | join(9050243..9050758,9051754..9053648,9054250..9054400,9055485..9056324) |
| Gene | LOC7457809 |
| GeneID | 7457809 |
| Organism | Populus trichocarpa |
Protein
| Length | 1133aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA17973 |
| db_source | XM_002311500.3 |
| Definition | RNA-dependent RNA polymerase 1 [Populus trichocarpa] |
EGGNOG-MAPPER Annotation
| COG_category | A |
| Description | Probably involved in the RNA silencing pathway and required for the generation of small interfering RNAs (siRNAs) |
| KEGG_TC | - |
| KEGG_Module | - |
| KEGG_Reaction | - |
| KEGG_rclass | - |
| BRITE |
ko00000
[VIEW IN KEGG] ko01000 [VIEW IN KEGG] ko03036 [VIEW IN KEGG] |
| KEGG_ko |
ko:K11699
[VIEW IN KEGG] |
| EC |
2.7.7.48
[VIEW IN KEGG]
[VIEW IN INGREDIENT] |
| KEGG_Pathway | - |
| GOs | - |
Sequence
| CDS: ATGAGTAAGACAGTTAAAGTTTCTGGATTCCCTTCTAGCACGACTGCAGGAGCAGTGCAGGTGTTTTTGGAATCACATACTGGTGGTGGAACTGTTGAAGCTCTTAAGATCAGGGAAATAAGAACGGGAGGTGCAAGGAAATACGCTATTGTCCAATTCACAACCACAAGAGCTGCTGAACAGATTATCTCCTTAGCTAATCCACGCCTGTGGTATGGTCATTCATATCTTAATGCTCGGCCAATGGATCGTGATATCATACCACAGCCCAGATCTTTTTTGCATACCATGGAAAGTGTGACACTTCACTTTGGCTATCAGACTTCTAAAGAGAAGTTTTCTGCTGTCTGGAGCGGGAACAATGTTTCTGTGAATTTTGGATTGGGAATGAGGAAGTTACATTTTTTCCTGTCACATAATCTAGCTGAATACAAGCTTAACCTTCTCTTTGAAAACATTTGGCAGATTGAACTACATCGCCCTCGTGGCCAAACTGTGAAGTATCTTCTAATTCAGTTATATGGTGCACCTCGGATTTATGAGAGAGACGTACCCTCTTCGTCGAATGTATTTGAGGATCCACTTCTCAATTATTTTAGGGATGTTCCTGATGAACAGTGGGTCAGGACAACTGATTTTACTCCATCATGCGGCATTGGGCATTCATCTTCATTATGTTTGGAACTTCCTAATCATCTACAACTTCCAAATTTCAACGAGAACTTTTTCTACTATAAAGAAAATGAAGGAACATTTGTTTTGGAGAGTGGTTTGACCTTTTCCCGCAATCCGGATCTAGTCCCCATTGTTGGCCCATCCTCAGGTGTTAATTTGCCTTATAACATCTTATTTAGGGTTAACTTGTTGGTTCAGAATGGGTGCCTTGCAGGGTCAATGCTCGATGATATTTTTTACAGGTTGGTTGATCCAAATAGAATGCCTGTCCGTTGCATAGAGTATGCCCTTGAGAAGCTATATCACCTGAAAGAATGTTGTTATGAACCTTCTAAGTGGTTCAATGAACAGTACAAAAAGTATCTTACCTCAGGAAACCCTCCAAGGTCACCTGTTCTATCCTTAGATGCTGGTTTGGTATACGTTTACAAGGTTCAAATAACTCCTTGTAAAGTGTTTTTCTGTGGTCCAGAGGTTAATGTCTCAAATCGTGTACTTCGCCAATATCGAGAAGACATCGATAACTTTCTTCGTGTTTCTTTTGTTGATGAGGAGTTAGAGAAAATTCATTCAACAGATGTATCTCCGCGAACATCTTCTAGAAATGAGCTTAGGAGAACTGCAATTTACAACAGGATTCTTTCCACTCTGCAAAATGGTATAGTTATTGGTGATAAGAAGTTTGAGTTCCTTGCCTTTTCATCCAGTCAGTTGCGGGAGAATTCATGCTGGATGTTTGCTTCAAGACTCGGGCTCACTGCTGCAGATATAAGGGCATGGATGGGCAGTTTTCATAAGATTAGAAATGTGGCTAGGTATGCTGCCAGACTGGGTCAATCCTTTGGTTCATCCACTGAAACTCTGAGTGTTAGCAGCCATGAAATTGAAATTATTCCGGACATAGAAGTTTCAAGGGGAGGAACTAGATATTTGTTCTCTGATGGTATTGGCAAAATATCTGCTGAATTTGCAAGGAAAGTGGCCATAAAATGTGGCTGCAAAGGTTTCACTCCATCTGCATTTCAGATTCGATATGCTGGCTATAAAGGTGTAGTAGCAGTTGATCCAACTTCATCGAAAAAATTATCATTGAGGAGGAGTATGTTCAAATACGAGTCTGAAAACACAAAACTGGATGTTCTAGCACATAGCAAATATCAGCCTTGTTTTCTGAATCGCCAACTCATTACTCTTCTTTCTACTCTTGGAGTTCCAGATCATCATTTTGAGAGAAAGCAGAGAGAAGCTGTAGATCAACTTGATGCTATGTTGACAGATCCATTAAGGGCACAGGAGGCACTGGAGTTGATGTCTCCAGGAGAGAATACCAACATTCTCAAGGAAATGCTTTTGTGTGGTTATCAGCCTGATGCTGAACCATTCCTTTCAATGATGCTCCAAACATTCCGGGCATCGAAGTTGCTGGAATTACGGACAAAAACAAGGATATTTATTCCAAATGGAAGATCAATGATGGGATGTCTAGATGAAACTAGAACCTTGGAACATGGGCAGGTATTTGTAAAATTTTCTGGCTCTAGATTTCGGAACTTGTATGATAGTTCTGACATGTTCAGTGAAAGAGGACGAGGACAGTGTTATCTGATTAAGGGAAGTGTAGTGGTGGCCAAAAACCCTTGCTTGCACCCAGGTGATTTGCGCATTTTAAAGGCAGTGGATGTGCCAGCTTTGCACCATATGGTTGATTGTGTTGTTTTTCCGCAGAAAGGTCCAAGACCTCACCCAAATGAATGCTCTGGAAGTGATTTGGATGGAGATATCTATTTTGTCTGTTGGGATCCGGAGTTGATTCCTAGTCAGCAAATCTCACCAATGGACTATACCCCAGAGCCCCCTCTGCAGCTGGATCATGATGTTACTATTGAGGAAGTCGAGGAGTATTTCACAAACTACATAGTTAATGACAGCTTGGGAGTAATTGCAAATGCTCACACTGCCCATGCCGATAAAGAATCTCTCAAAGCAATGAGTGAACCATGCGTAGAGCTTGCACGTAAATTTTCAATTGCGGTTGACTTTCCAAAGACTGGAGTACCAGCTGAAATACCTTCTAATCTTCGTGCAAGAGAATATCCTGACTTTATGGAAAAGCCTGACAAACCCTCCTATGAATCACGTAATGTGATTGGAAAGCTTTTCCGAGAAGTGAAAGACATTGCGCCACGGACCAGCTCTATTAGGTCATTTACATCAGATGTGGCGAGGCAGTGTTATGACCCTGATATGGAAGTTGATGGCTTTGAGGATTACATAGATGATGCCTTTTATTACAAAAGCAATTATGATTACAAGCTGGGCAATCTTATGGAGTATTACGGCATCAAAACCGAGGCAGAACTTCTTAGTGGAAGTTTCATGAAAATGTCAAAATCTTTCACGAAGAAAAGGGATGCAGAGGCGATTGGAATGGCAGTAAGGTCTTTGAAAAAAGAGGCTAGGTCCTGGTTCAATGAAAAGGGAAGCGGGTTAGATTCTCAAGCTGATGATGTAGACGCAAAAGCCTCAGCCTGGTACCATGTCACATATCATCATAATTATTGGGGTTGCTACAATGAGGGAATGAATCGAGACCATTTTCTTAGTTTTCCATGGTGTGTCTATGATAAGCTGATCCAGATCAAGAGGAGGAATAGTGCAAGAATTAGAAGATCTCTAATTTTGCCTTCTGTCGAACGTCAATTCAGTCGCGGATTACATTTGAGTTAA |
| Protein: MSKTVKVSGFPSSTTAGAVQVFLESHTGGGTVEALKIREIRTGGARKYAIVQFTTTRAAEQIISLANPRLWYGHSYLNARPMDRDIIPQPRSFLHTMESVTLHFGYQTSKEKFSAVWSGNNVSVNFGLGMRKLHFFLSHNLAEYKLNLLFENIWQIELHRPRGQTVKYLLIQLYGAPRIYERDVPSSSNVFEDPLLNYFRDVPDEQWVRTTDFTPSCGIGHSSSLCLELPNHLQLPNFNENFFYYKENEGTFVLESGLTFSRNPDLVPIVGPSSGVNLPYNILFRVNLLVQNGCLAGSMLDDIFYRLVDPNRMPVRCIEYALEKLYHLKECCYEPSKWFNEQYKKYLTSGNPPRSPVLSLDAGLVYVYKVQITPCKVFFCGPEVNVSNRVLRQYREDIDNFLRVSFVDEELEKIHSTDVSPRTSSRNELRRTAIYNRILSTLQNGIVIGDKKFEFLAFSSSQLRENSCWMFASRLGLTAADIRAWMGSFHKIRNVARYAARLGQSFGSSTETLSVSSHEIEIIPDIEVSRGGTRYLFSDGIGKISAEFARKVAIKCGCKGFTPSAFQIRYAGYKGVVAVDPTSSKKLSLRRSMFKYESENTKLDVLAHSKYQPCFLNRQLITLLSTLGVPDHHFERKQREAVDQLDAMLTDPLRAQEALELMSPGENTNILKEMLLCGYQPDAEPFLSMMLQTFRASKLLELRTKTRIFIPNGRSMMGCLDETRTLEHGQVFVKFSGSRFRNLYDSSDMFSERGRGQCYLIKGSVVVAKNPCLHPGDLRILKAVDVPALHHMVDCVVFPQKGPRPHPNECSGSDLDGDIYFVCWDPELIPSQQISPMDYTPEPPLQLDHDVTIEEVEEYFTNYIVNDSLGVIANAHTAHADKESLKAMSEPCVELARKFSIAVDFPKTGVPAEIPSNLRAREYPDFMEKPDKPSYESRNVIGKLFREVKDIAPRTSSIRSFTSDVARQCYDPDMEVDGFEDYIDDAFYYKSNYDYKLGNLMEYYGIKTEAELLSGSFMKMSKSFTKKRDAEAIGMAVRSLKKEARSWFNEKGSGLDSQADDVDAKASAWYHVTYHHNYWGCYNEGMNRDHFLSFPWCVYDKLIQIKRRNSARIRRSLILPSVERQFSRGLHLS |